Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | RT97_01815 | Not Available | Negative | 395420 - 396214 | 29158.3 |
| organic solvent tolerance protein osta | RT97_01820 | Not Available | Negative | 396211 - 396927 | 25105.7 |
| dsba oxidoreductase | RT97_01825 | Not Available | Negative | 397124 - 397771 | 23333.9 |
| sporulation protein | RT97_01830 | Not Available | Negative | 397936 - 398703 | 25917.7 |
| arginine--trna ligase | RT97_01835 | Not Available | Negative | 398712 - 400397 | 61307.6 |
| hypothetical protein | RT97_01840 | Not Available | Positive | 400529 - 400852 | 10384.6 |
| membrane protein | RT97_01845 | Not Available | Negative | 400921 - 401376 | 16848.4 |
| lysr family transcriptional regulator | RT97_01850 | Not Available | Negative | 401562 - 402488 | 33569.1 |
| coa-transferase | RT97_01855 | Not Available | Negative | 403549 - 403983 | 16000.1 |
| alpha/beta hydrolase | RT97_01860 | Not Available | Negative | 403984 - 404216 | 8011.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
