Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_18995 | Not Available | Negative | 4100544 - 4101524 | 34492.4 |
| lysr family transcriptional regulator | RT97_19000 | Not Available | Positive | 4101716 - 4102663 | 34012.5 |
| chemotaxis protein chey | RT97_19005 | Not Available | Positive | 4102841 - 4103584 | 28016.0 |
| alpha/beta hydrolase | RT97_19010 | Not Available | Negative | 4103604 - 4104542 | 33265.6 |
| thioredoxin | RT97_19015 | Not Available | Negative | 4104786 - 4105379 | 21374.4 |
| hypothetical protein | RT97_19020 | Not Available | Positive | 4105592 - 4105807 | 7631.05 |
| hypothetical protein | RT97_19025 | Not Available | Positive | 4106005 - 4106433 | 15082.1 |
| arac family transcriptional regulator | RT97_19030 | Not Available | Negative | 4106414 - 4107301 | 33380.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | RT97_19035 | Not Available | Positive | 4107480 - 4108277 | 28539.3 |
| abc transporter substrate-binding protein | RT97_19040 | Not Available | Negative | 4108290 - 4109309 | 36293.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
