Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_18945 | Not Available | Positive | 4088462 - 4088908 | 15609.3 |
| phospholipase | RT97_18950 | Not Available | Positive | 4088905 - 4090071 | 43018.6 |
| nad synthetase | RT97_18955 | Not Available | Positive | 4090099 - 4090956 | 30171.2 |
| aldehyde dehydrogenase | RT97_18960 | Not Available | Positive | 4091032 - 4092417 | 50241.6 |
| signal peptide protein | RT97_18965 | Not Available | Positive | 4092526 - 4093299 | 26560.6 |
| luxr family transcriptional regulator | RT97_18970 | Not Available | Positive | 4093362 - 4094810 | 50954.8 |
| cytochrome c biogenesis protein | RT97_18975 | Not Available | Negative | 4095085 - 4096896 | 64080.5 |
| atpase | RT97_18980 | Not Available | Negative | 4097033 - 4098394 | 49605.6 |
| peroxiredoxin | RT97_18985 | Not Available | Negative | 4098511 - 4098927 | 14293.9 |
| microcystin degradation protein mlrc | RT97_18990 | Not Available | Negative | 4099060 - 4100541 | 52690.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
