Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-disulfide reductase | RT97_18895 | Not Available | Positive | 4074899 - 4077073 | 75137.6 |
| alkyl hydroperoxide reductase | RT97_18900 | Not Available | Positive | 4077232 - 4077861 | 21821.0 |
| major facilitator transporter | RT97_18905 | Not Available | Positive | 4077990 - 4079333 | 48251.9 |
| uroporphyrinogen decarboxylase | RT97_18910 | Not Available | Positive | 4079396 - 4080505 | 39668.6 |
| primosomal protein n' | RT97_18915 | Not Available | Positive | 4081009 - 4083084 | 74783.0 |
| signal peptide protein | RT97_18920 | Not Available | Positive | 4083135 - 4084034 | 32123.3 |
| hypothetical protein | RT97_18925 | Not Available | Negative | 4084066 - 4084278 | 7807.72 |
| hypothetical protein | RT97_18930 | Not Available | Positive | 4084570 - 4085205 | 22126.0 |
| transporter | RT97_18935 | Not Available | Negative | 4085214 - 4086233 | 34671.6 |
| atp-dependent dna helicase rep | RT97_18940 | Not Available | Positive | 4086357 - 4088465 | 78320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
