Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin storage protein | RT97_18845 | Not Available | Positive | 4062925 - 4064979 | 76104.1 |
| n-glycosyltransferase | RT97_18850 | Not Available | Positive | 4065006 - 4066253 | 47342.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | RT97_18855 | Not Available | Positive | 4066270 - 4066833 | 20971.3 |
| 3-oxoacyl-acp reductase | RT97_18860 | Not Available | Positive | 4066936 - 4067733 | 27343.1 |
| lysr family transcriptional regulator | RT97_18865 | Not Available | Negative | 4068115 - 4069023 | 33386.1 |
| nadph:quinone reductase | RT97_18870 | Not Available | Positive | 4069110 - 4070120 | 35536.0 |
| chloride channel protein | RT97_18875 | Not Available | Negative | 4070122 - 4071870 | 61266.3 |
| gcn5 family acetyltransferase | RT97_18880 | Not Available | Positive | 4071960 - 4072514 | 20546.8 |
| sorbosone dehydrogenase | RT97_18885 | Not Available | Negative | 4072530 - 4073906 | 48338.8 |
| ala-trna(pro) hydrolase | RT97_18890 | Not Available | Positive | 4074037 - 4074795 | 27065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
