Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | RT97_18795 | Not Available | Positive | 4052220 - 4053182 | 33758.2 |
| 2-aminoadipate aminotransferase | RT97_18800 | Not Available | Positive | 4053223 - 4054482 | 45286.2 |
| lysine transporter lyse | RT97_18805 | Not Available | Positive | 4054496 - 4055158 | 23166.1 |
| glutathione s-transferase | RT97_18810 | Not Available | Positive | 4055164 - 4055805 | 24210.7 |
| phenazine biosynthesis protein phzf | RT97_18815 | Not Available | Positive | 4055938 - 4056861 | 32470.8 |
| hypothetical protein | RT97_18820 | Not Available | Positive | 4056875 - 4057567 | 24316.1 |
| lysine transporter lyse | RT97_18825 | Not Available | Positive | 4057570 - 4058202 | 22406.2 |
| hypothetical protein | RT97_18830 | Not Available | Positive | 4058223 - 4059194 | 34495.8 |
| creatininase | RT97_18835 | Not Available | Negative | 4059202 - 4060038 | 28998.9 |
| hypothetical protein | RT97_18840 | Not Available | Positive | 4060418 - 4062916 | 90773.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
