Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_18735 | Not Available | Positive | 4039113 - 4041212 | 75678.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | RT97_18750 | Not Available | Negative | 4042622 - 4043170 | 20156.8 |
| glucose-1-phosphate thymidylyltransferase | RT97_18755 | Not Available | Negative | 4043167 - 4044063 | 32715.1 |
| dtdp-4-dehydrorhamnose reductase | RT97_18760 | Not Available | Negative | 4044096 - 4044986 | 31924.9 |
| spore coat protein | RT97_18765 | Not Available | Negative | 4044983 - 4046056 | 39922.0 |
| amino acid dehydrogenase | RT97_18770 | Not Available | Positive | 4046489 - 4047790 | 47287.5 |
| hypothetical protein | RT97_18775 | Not Available | Negative | 4047885 - 4049162 | 44566.0 |
| hypothetical protein | RT97_18780 | Not Available | Negative | 4049208 - 4049963 | 26205.2 |
| gntr family transcriptional regulator | RT97_18785 | Not Available | Negative | 4050029 - 4051474 | 52860.0 |
| lysine transporter lyse | RT97_18790 | Not Available | Positive | 4051565 - 4052164 | 21246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
