Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-glucose 4,6-dehydratase | RT97_18670 | Not Available | Negative | 4021809 - 4022879 | 39006.9 |
| glucose-1-phosphate cytidylyltransferase | RT97_18675 | Not Available | Negative | 4022876 - 4023649 | 28887.6 |
| hypothetical protein | RT97_18685 | Not Available | Negative | 4025289 - 4026449 | 43908.7 |
| hypothetical protein | RT97_18695 | Not Available | Positive | 4030129 - 4031229 | 39314.3 |
| hypothetical protein | RT97_18705 | Not Available | Positive | 4032895 - 4034307 | 52788.6 |
| fad-linked oxidase | RT97_18710 | Not Available | Positive | 4034304 - 4035641 | 48567.0 |
| short-chain dehydrogenase | RT97_18715 | Not Available | Positive | 4035638 - 4036384 | 26323.8 |
| nad-dependent dehydratase | RT97_18720 | Not Available | Positive | 4036422 - 4037357 | 35570.0 |
| hypothetical protein | RT97_18725 | Not Available | Positive | 4037421 - 4038716 | 48360.4 |
| membrane protein | RT97_18730 | Not Available | Positive | 4038727 - 4039116 | 14060.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
