Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | RT97_18560 | Not Available | Positive | 3994150 - 3995211 | 36869.2 |
| catalase | RT97_18565 | Not Available | Negative | 3995334 - 3996857 | 57113.5 |
| dihydroorotate oxidase | RT97_18570 | Not Available | Negative | 3996984 - 3997631 | 23477.2 |
| acetylglutamate kinase | RT97_18575 | Not Available | Negative | 3997697 - 3998590 | 31509.4 |
| glycosyl transferase | RT97_18580 | Not Available | Negative | 3998641 - 3999738 | 40109.5 |
| glycosyl transferase | RT97_18585 | Not Available | Positive | 3999784 - 4000554 | 28588.6 |
| acyltransferase | RT97_18590 | Not Available | Positive | 4000670 - 4002670 | 73842.6 |
| glycosyl transferase family 2 | RT97_18595 | Not Available | Negative | 4002667 - 4003728 | 39999.9 |
| glycosyl transferase family 2 | RT97_18600 | Not Available | Negative | 4003748 - 4004752 | 37386.1 |
| mannose-1-phosphate guanyltransferase | RT97_18610 | Not Available | Positive | 4006669 - 4008087 | 51501.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
