Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | RT97_18510 | Not Available | Negative | 3984459 - 3985259 | 29091.4 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | RT97_18515 | Not Available | Negative | 3985310 - 3986158 | 30517.3 |
| 3-oxoacyl-acp reductase | RT97_18520 | Not Available | Negative | 3986184 - 3986930 | 26033.2 |
| oxidoreductase | RT97_18525 | Not Available | Negative | 3986927 - 3987661 | 25509.9 |
| gntr family transcriptional regulator | RT97_18530 | Not Available | Positive | 3987783 - 3988490 | 25946.1 |
| abc transporter substrate-binding protein | RT97_18535 | Not Available | Positive | 3988598 - 3989563 | 35234.0 |
| abc transporter permease | RT97_18540 | Not Available | Positive | 3989573 - 3990130 | 20576.1 |
| abc transporter permease | RT97_18545 | Not Available | Positive | 3990169 - 3991563 | 49923.7 |
| galactarate dehydratase | RT97_18550 | Not Available | Positive | 3991611 - 3993137 | 53774.8 |
| gluconolactonase | RT97_18555 | Not Available | Positive | 3993214 - 3994146 | 34227.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
