Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_01765 | Not Available | Positive | 382692 - 383126 | 15502.5 |
| peptidase c1 | RT97_01770 | Not Available | Negative | 383128 - 386037 | 104981.0 |
| rna methyltransferase | RT97_01775 | Not Available | Negative | 386259 - 387479 | 44919.5 |
| histidine kinase | RT97_01780 | Not Available | Positive | 387562 - 389349 | 63764.8 |
| cytochrome b561 | RT97_01785 | Not Available | Positive | 389435 - 390028 | 21715.0 |
| polyisoprenoid-binding protein | RT97_01790 | Not Available | Positive | 390043 - 390618 | 19947.2 |
| hypothetical protein | RT97_01795 | Not Available | Positive | 390671 - 391303 | 22709.1 |
| threonine transporter | RT97_01800 | Not Available | Positive | 391317 - 391964 | 22134.5 |
| phospholipase | RT97_01805 | Not Available | Negative | 392058 - 393659 | 59026.8 |
| rna polymerase subunit sigma-54 | RT97_01810 | Not Available | Negative | 393673 - 395265 | 58552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
