Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoin utilization protein b | RT97_18460 | Not Available | Negative | 3974513 - 3976222 | 60510.4 |
| 3-isopropylmalate dehydratase | RT97_18465 | Not Available | Negative | 3976215 - 3976733 | 17969.7 |
| 3-isopropylmalate dehydratase | RT97_18470 | Not Available | Negative | 3976730 - 3978022 | 45925.1 |
| mfs transporter | RT97_18475 | Not Available | Negative | 3978019 - 3978975 | 32906.8 |
| leucine/isoleucine/valine transporter atp-binding subunit | RT97_18480 | Not Available | Negative | 3979015 - 3979725 | 25548.3 |
| branched-chain amino acid abc transporter atp-binding protein | RT97_18485 | Not Available | Negative | 3979722 - 3980483 | 26685.6 |
| abc transporter permease | RT97_18490 | Not Available | Negative | 3980476 - 3981444 | 33894.4 |
| branched-chain amino acid abc transporter permease | RT97_18495 | Not Available | Negative | 3981510 - 3982382 | 30404.4 |
| abc transporter substrate-binding protein | RT97_18500 | Not Available | Negative | 3982396 - 3983601 | 43413.5 |
| gntr family transcriptional regulator | RT97_18505 | Not Available | Negative | 3983623 - 3984405 | 28791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
