Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_18410 | Not Available | Positive | 3963692 - 3964330 | 21066.2 |
| threonine dehydratase | RT97_18415 | Not Available | Negative | 3964400 - 3966016 | 58373.9 |
| hypothetical protein | RT97_18420 | Not Available | Positive | 3966067 - 3967197 | 42533.9 |
| tetr family transcriptional regulator | RT97_18425 | Not Available | Negative | 3967466 - 3967676 | 7133.72 |
| oxidoreductase | RT97_18430 | Not Available | Negative | 3967804 - 3968562 | 26329.6 |
| lysr family transcriptional regulator | RT97_18435 | Not Available | Positive | 3968673 - 3969560 | 32319.0 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | RT97_18440 | Not Available | Negative | 3969582 - 3970445 | 31062.1 |
| 3-ketosteroid dehydrogenase | RT97_18445 | Not Available | Negative | 3970442 - 3971854 | 48265.6 |
| cysteine hydrolase | RT97_18450 | Not Available | Negative | 3971851 - 3972465 | 21374.6 |
| hydantoin utilization protein a | RT97_18455 | Not Available | Negative | 3972462 - 3974516 | 72317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
