Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspe | RT97_18360 | Not Available | Negative | 3954291 - 3955682 | 50122.4 |
| general secretion pathway protein gspd | RT97_18365 | Not Available | Negative | 3955688 - 3958000 | 80798.3 |
| general secretion pathway protein gspn | RT97_18370 | Not Available | Negative | 3958003 - 3958812 | 28385.1 |
| general secretion pathway protein gspm | RT97_18375 | Not Available | Negative | 3958823 - 3959359 | 18954.0 |
| general secretion pathway protein gspl | RT97_18380 | Not Available | Negative | 3959356 - 3960567 | 42797.8 |
| general secretion pathway protein gspk | RT97_18385 | Not Available | Negative | 3960696 - 3961700 | 35475.2 |
| general secretion pathway protein j | RT97_18390 | Not Available | Negative | 3961697 - 3962374 | 24517.1 |
| general secretion pathway protein gspi | RT97_18395 | Not Available | Negative | 3962374 - 3962757 | 13565.5 |
| general secretion pathway protein gsph | RT97_18400 | Not Available | Negative | 3962754 - 3963227 | 16092.4 |
| general secretion pathway protein gspg | RT97_18405 | Not Available | Negative | 3963202 - 3963642 | 16059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
