Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RT97_18260 | Not Available | Negative | 3928111 - 3929910 | 66651.9 |
| phosphohydrolase | RT97_18265 | Not Available | Negative | 3930020 - 3930580 | 20407.5 |
| phosphonate abc transporter substrate-binding protein | RT97_18270 | Not Available | Positive | 3930756 - 3931793 | 37890.6 |
| sulfate abc transporter atp-binding protein | RT97_18275 | Not Available | Positive | 3931933 - 3932988 | 37519.6 |
| phosphonate abc transporter permease | RT97_18280 | Not Available | Positive | 3932991 - 3934706 | 60839.4 |
| mfs transporter | RT97_18285 | Not Available | Positive | 3935004 - 3936269 | 44195.4 |
| gntr family transcriptional regulator | RT97_18290 | Not Available | Negative | 3936217 - 3937647 | 51275.8 |
| membrane protein | RT97_18295 | Not Available | Positive | 3937745 - 3937933 | 6459.31 |
| cytochrome c553 | RT97_18300 | Not Available | Positive | 3937930 - 3938637 | 24757.0 |
| alcohol dehydrogenase | RT97_18305 | Not Available | Positive | 3938645 - 3939928 | 45324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
