Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_18210 | Not Available | Negative | 3916498 - 3916752 | 9794.8 |
| hypothetical protein | RT97_18215 | Not Available | Negative | 3916895 - 3917356 | 15836.1 |
| hypothetical protein | RT97_18220 | Not Available | Negative | 3917388 - 3917798 | 13781.3 |
| cyanophycin synthetase | RT97_18225 | Not Available | Negative | 3917950 - 3920517 | 90693.8 |
| cyanophycin synthetase | RT97_18230 | Not Available | Negative | 3920559 - 3922850 | 80921.9 |
| abc transporter | RT97_18235 | Not Available | Positive | 3922936 - 3925209 | 83176.7 |
| hypothetical protein | RT97_18240 | Not Available | Positive | 3925206 - 3925691 | 17700.2 |
| acyltransferase | RT97_18245 | Not Available | Negative | 3925699 - 3926841 | 41743.9 |
| membrane protein | RT97_18250 | Not Available | Negative | 3926929 - 3927339 | 14728.4 |
| 7-cyano-7-deazaguanine synthase | RT97_18255 | Not Available | Positive | 3927416 - 3928129 | 26207.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
