Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | RT97_18155 | Not Available | Positive | 3903218 - 3904183 | 35041.5 |
| sugar abc transporter substrate-binding protein | RT97_18160 | Not Available | Positive | 3904327 - 3905397 | 38537.4 |
| abc transporter atp-binding protein | RT97_18165 | Not Available | Positive | 3905433 - 3906959 | 55261.2 |
| abc transporter permease | RT97_18170 | Not Available | Positive | 3906946 - 3908154 | 42501.4 |
| sugar abc transporter atp-binding protein | RT97_18175 | Not Available | Positive | 3908159 - 3909679 | 54336.0 |
| sugar abc transporter permease | RT97_18180 | Not Available | Positive | 3909825 - 3910859 | 36031.4 |
| abc transporter permease | RT97_18185 | Not Available | Positive | 3910856 - 3911890 | 36386.5 |
| dihydroxy-acid dehydratase | RT97_18190 | Not Available | Positive | 3911931 - 3913679 | 62454.9 |
| cytochrome c biogenesis protein ccda | RT97_18195 | Not Available | Positive | 3913689 - 3914606 | 33400.5 |
| short-chain dehydrogenase | RT97_18205 | Not Available | Positive | 3915693 - 3916472 | 27138.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
