Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein impa | RT97_18100 | Not Available | Negative | 3885277 - 3887832 | 93422.8 |
| oxidoreductase | RT97_18105 | Not Available | Negative | 3888092 - 3889213 | 39928.7 |
| transporter | RT97_18110 | Not Available | Negative | 3889218 - 3890201 | 33833.2 |
| lysr family transcriptional regulator | RT97_18115 | Not Available | Positive | 3890335 - 3891213 | 31539.0 |
| mur ligase | RT97_18120 | Not Available | Positive | 3891353 - 3896128 | 173792.0 |
| aldose epimerase | RT97_18130 | Not Available | Positive | 3897081 - 3898172 | 39570.2 |
| gluconolactonase | RT97_18135 | Not Available | Negative | 3898491 - 3899426 | 34360.1 |
| 3-oxoacyl-acp reductase | RT97_18140 | Not Available | Positive | 3899542 - 3900315 | 27388.6 |
| lysr family transcriptional regulator | RT97_18145 | Not Available | Negative | 3900438 - 3901397 | 35428.6 |
| aldehyde dehydrogenase | RT97_18150 | Not Available | Positive | 3901539 - 3902993 | 51514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
