Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase | RT97_18045 | Not Available | Negative | 3874624 - 3876462 | 62205.2 |
| hypothetical protein | RT97_18050 | Not Available | Negative | 3876548 - 3876991 | 15467.7 |
| hydratase | RT97_18055 | Not Available | Positive | 3877085 - 3877879 | 28858.2 |
| lysr family transcriptional regulator | RT97_18060 | Not Available | Positive | 3877888 - 3878775 | 33132.0 |
| 2-hydroxy-3-oxopropionate reductase | RT97_18065 | Not Available | Negative | 3878791 - 3879654 | 29165.7 |
| aldehyde dehydrogenase | RT97_18070 | Not Available | Negative | 3879704 - 3881155 | 50629.3 |
| amidase | RT97_18075 | Not Available | Negative | 3881187 - 3882587 | 49901.8 |
| abc transporter substrate-binding protein | RT97_18080 | Not Available | Negative | 3882592 - 3883035 | 16524.7 |
| hypothetical protein | RT97_18085 | Not Available | Negative | 3883465 - 3883719 | 9766.45 |
| hypothetical protein | RT97_18090 | Not Available | Negative | 3883995 - 3884384 | 14847.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
