Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_01700 | Not Available | Negative | 370032 - 370373 | 12430.6 |
| hypothetical protein | RT97_01705 | Not Available | Negative | 370382 - 371272 | 33172.8 |
| signal peptide protein | RT97_01715 | Not Available | Negative | 372142 - 373785 | 60225.9 |
| hypothetical protein | RT97_01730 | Not Available | Negative | 376436 - 376666 | 8685.69 |
| hypothetical protein | RT97_01735 | Not Available | Negative | 376663 - 377388 | 26801.2 |
| hypothetical protein | RT97_01740 | Not Available | Negative | 377388 - 378308 | 33047.5 |
| hypothetical protein | RT97_01745 | Not Available | Negative | 378391 - 380298 | 68375.3 |
| pilus assembly protein | RT97_01750 | Not Available | Negative | 380349 - 380618 | 9165.11 |
| arac family transcriptional regulator | RT97_01755 | Not Available | Negative | 380788 - 381750 | 36234.3 |
| twitching motility protein pilt | RT97_01760 | Not Available | Negative | 382112 - 382543 | 15372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
