Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | RT97_17940 | Not Available | Positive | 3853025 - 3853792 | 28144.7 |
| bile acid:sodium symporter | RT97_17945 | Not Available | Positive | 3853889 - 3854767 | 30839.1 |
| lysr family transcriptional regulator | RT97_17950 | Not Available | Positive | 3854775 - 3855701 | 33287.5 |
| tricarballylate dehydrogenase | RT97_17955 | Not Available | Positive | 3855779 - 3857206 | 51579.3 |
| tricarballylate utilization protein b | RT97_17960 | Not Available | Positive | 3857190 - 3858425 | 44677.9 |
| aldolase | RT97_17965 | Not Available | Positive | 3858470 - 3859258 | 29013.9 |
| lipoprotein | RT97_17970 | Not Available | Positive | 3859299 - 3860267 | 32936.2 |
| amidohydrolase | RT97_17975 | Not Available | Positive | 3860281 - 3861180 | 32634.6 |
| abc transporter substrate-binding protein | RT97_17980 | Not Available | Positive | 3861264 - 3862223 | 33557.5 |
| 2-hydroxyacid dehydrogenase | RT97_17985 | Not Available | Positive | 3862220 - 3863179 | 33418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
