Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | RT97_17885 | Not Available | Negative | 3843929 - 3844480 | 19504.0 |
| doxx family protein | RT97_17890 | Not Available | Negative | 3844630 - 3845046 | 14553.3 |
| quercetin 2,3-dioxygenase | RT97_17895 | Not Available | Negative | 3845123 - 3845824 | 25341.9 |
| lysr family transcriptional regulator | RT97_17900 | Not Available | Positive | 3845985 - 3846938 | 34279.4 |
| amine oxidase | RT97_17905 | Not Available | Positive | 3847119 - 3848117 | 36383.3 |
| glutamyl-trna synthetase | RT97_17910 | Not Available | Positive | 3848130 - 3849041 | 33077.1 |
| trna (guanine-n7)-methyltransferase | RT97_17915 | Not Available | Positive | 3849041 - 3849799 | 27936.5 |
| abc transporter substrate-binding protein | RT97_17925 | Not Available | Positive | 3850371 - 3851543 | 40387.6 |
| crp/fnr family transcriptional regulator | RT97_17930 | Not Available | Negative | 3851550 - 3852272 | 25942.8 |
| phosphohydrolase | RT97_17935 | Not Available | Positive | 3852404 - 3852994 | 22376.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
