Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_17830 | Not Available | Positive | 3826402 - 3827622 | 44014.4 |
| hypothetical protein | RT97_17840 | Not Available | Negative | 3832899 - 3833249 | 12475.9 |
| dna polymerase iii subunit alpha | RT97_17845 | Not Available | Negative | 3833378 - 3836896 | 130268.0 |
| hypothetical protein | RT97_17850 | Not Available | Positive | 3837044 - 3837835 | 29054.6 |
| transcriptional regulator | RT97_17855 | Not Available | Positive | 3837849 - 3838550 | 25184.4 |
| histidine kinase | RT97_17860 | Not Available | Positive | 3838567 - 3840078 | 54876.6 |
| tripartite tricarboxylate transporter tctb | RT97_17865 | Not Available | Positive | 3840275 - 3840712 | 15050.9 |
| hypothetical protein | RT97_17870 | Not Available | Positive | 3840717 - 3842285 | 55164.2 |
| hypothetical protein | RT97_17875 | Not Available | Negative | 3842352 - 3842768 | 15767.3 |
| pirin | RT97_17880 | Not Available | Negative | 3842865 - 3843788 | 33254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
