Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase subunit alpha | RT97_17780 | Not Available | Positive | 3817873 - 3818538 | 23176.5 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | RT97_17785 | Not Available | Positive | 3818535 - 3819692 | 40806.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | RT97_17790 | Not Available | Positive | 3819699 - 3820160 | 16026.3 |
| antitermination protein nusb | RT97_17795 | Not Available | Positive | 3820157 - 3820693 | 19683.2 |
| aminotransferase | RT97_17800 | Not Available | Positive | 3820690 - 3821886 | 43785.2 |
| 4-hydroxybenzoyl-coa thioesterase | RT97_17805 | Not Available | Positive | 3821948 - 3822406 | 17212.7 |
| protein tolq | RT97_17810 | Not Available | Positive | 3822403 - 3823125 | 26020.5 |
| biopolymer transporter exbd | RT97_17815 | Not Available | Positive | 3823140 - 3823577 | 15413.0 |
| cell envelope biogenesis protein tola | RT97_17820 | Not Available | Positive | 3823581 - 3824492 | 32310.2 |
| cell division protein | RT97_17825 | Not Available | Positive | 3824585 - 3826315 | 62898.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
