Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_17720 | Not Available | Negative | 3799181 - 3802063 | 101644.0 |
| hypothetical protein | RT97_17725 | Not Available | Negative | 3802254 - 3806081 | 134946.0 |
| lytic transglycosylase | RT97_17730 | Not Available | Positive | 3806683 - 3807537 | 30066.2 |
| serine hydroxymethyltransferase | RT97_17735 | Not Available | Positive | 3807732 - 3808976 | 44828.9 |
| nrdr family transcriptional regulator | RT97_17740 | Not Available | Positive | 3808998 - 3809441 | 17138.8 |
| hypothetical protein | RT97_17750 | Not Available | Negative | 3810036 - 3810446 | 14786.6 |
| hypothetical protein | RT97_17760 | Not Available | Negative | 3814295 - 3814936 | 22309.3 |
| hypothetical protein | RT97_17765 | Not Available | Negative | 3814951 - 3815868 | 32355.9 |
| hypothetical protein | RT97_17770 | Not Available | Negative | 3815912 - 3816523 | 21056.2 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | RT97_17775 | Not Available | Positive | 3816703 - 3817830 | 39492.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
