Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | RT97_17670 | Not Available | Negative | 3790138 - 3791406 | 45489.6 |
| trna(ile)-lysidine synthetase | RT97_17675 | Not Available | Negative | 3791468 - 3792439 | 35210.9 |
| acetyl-coa carboxylase subunit alpha | RT97_17680 | Not Available | Negative | 3792447 - 3793427 | 36583.7 |
| dna-3-methyladenine glycosylase | RT97_17685 | Not Available | Negative | 3793447 - 3794097 | 24253.4 |
| cysteinyl-trna synthetase | RT97_17690 | Not Available | Negative | 3794115 - 3795491 | 50485.3 |
| hypothetical protein | RT97_17695 | Not Available | Positive | 3795704 - 3796294 | 21381.6 |
| peptidylprolyl isomerase | RT97_17700 | Not Available | Positive | 3796371 - 3796961 | 20957.0 |
| cyclophilin | RT97_17705 | Not Available | Positive | 3796995 - 3797507 | 18433.8 |
| udp-2,3-diacylglucosamine hydrolase | RT97_17710 | Not Available | Positive | 3797527 - 3798303 | 28746.2 |
| membrane protein | RT97_17715 | Not Available | Positive | 3798317 - 3799108 | 29372.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
