Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein s4 | RT97_17620 | Not Available | Positive | 3781468 - 3781911 | 16542.5 |
| polyphosphate kinase | RT97_17625 | Not Available | Positive | 3781956 - 3782762 | 30725.0 |
| hypothetical protein | RT97_17630 | Not Available | Positive | 3782877 - 3783107 | 8138.96 |
| hypothetical protein | RT97_17635 | Not Available | Negative | 3783159 - 3783830 | 23840.7 |
| cytochrome c | RT97_17640 | Not Available | Positive | 3784015 - 3784323 | 10783.0 |
| histidine kinase | RT97_17645 | Not Available | Negative | 3784325 - 3786298 | 72551.0 |
| (2fe-2s)-binding protein | RT97_17650 | Not Available | Negative | 3786413 - 3786871 | 16262.8 |
| isoquinoline 1-oxidoreductase | RT97_17655 | Not Available | Negative | 3786882 - 3789074 | 77039.1 |
| crp/fnr family transcriptional regulator | RT97_17660 | Not Available | Positive | 3789261 - 3789962 | 25649.1 |
| Trna-ser | Not Available | Not Available | Positive | 3790019 - 3790111 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
