Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | RT97_17565 | Not Available | Positive | 3766674 - 3767423 | 27662.2 |
| rnd transporter | RT97_17570 | Not Available | Positive | 3767420 - 3768928 | 52519.4 |
| acr/rnd family transmembrane transporter | RT97_17580 | Not Available | Positive | 3770195 - 3773311 | 111299.0 |
| dipeptidyl aminopeptidase | RT97_17585 | Not Available | Negative | 3773373 - 3774728 | 48546.5 |
| hypothetical protein | RT97_17590 | Not Available | Positive | 3774977 - 3775918 | 33161.6 |
| tripartite tricarboxylate transporter tcta | RT97_17595 | Not Available | Negative | 3775975 - 3777498 | 52977.3 |
| tripartite tricarboxylate transporter tctb | RT97_17600 | Not Available | Negative | 3777500 - 3778048 | 18939.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | RT97_17605 | Not Available | Negative | 3778188 - 3779147 | 32789.6 |
| chemotaxis protein chey | RT97_17610 | Not Available | Positive | 3779326 - 3780006 | 24948.6 |
| histidine kinase | RT97_17615 | Not Available | Positive | 3780019 - 3781464 | 52770.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
