Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | RT97_17515 | Not Available | Negative | 3755905 - 3756789 | 32591.0 |
| abc transporter permease | RT97_17520 | Not Available | Negative | 3756786 - 3757853 | 38167.9 |
| abc transporter permease | RT97_17525 | Not Available | Negative | 3757867 - 3758847 | 34635.2 |
| abc transporter atp-binding protein | RT97_17530 | Not Available | Negative | 3758844 - 3759572 | 26092.0 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_17535 | Not Available | Negative | 3759718 - 3760485 | 27331.1 |
| fibronectin | RT97_17540 | Not Available | Negative | 3760519 - 3761967 | 49626.1 |
| abc transporter permease | RT97_17545 | Not Available | Negative | 3762223 - 3763410 | 42611.5 |
| hypothetical protein | RT97_17550 | Not Available | Negative | 3763568 - 3763831 | 10007.9 |
| hypothetical protein | RT97_17555 | Not Available | Negative | 3763853 - 3764878 | 38448.1 |
| fis family transcriptional regulator | RT97_17560 | Not Available | Negative | 3765004 - 3766530 | 55429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
