Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transport protein kup | RT97_17465 | Not Available | Negative | 3747029 - 3748873 | 66187.3 |
| squalene synthase | RT97_17470 | Not Available | Positive | 3749022 - 3749936 | 33876.5 |
| phytoene synthase | RT97_17475 | Not Available | Positive | 3749933 - 3750772 | 31577.1 |
| desaturase | RT97_17480 | Not Available | Positive | 3750769 - 3752028 | 44211.6 |
| hypothetical protein | RT97_17485 | Not Available | Positive | 3752025 - 3752327 | 11215.7 |
| lysine transporter lyse | RT97_17490 | Not Available | Negative | 3752340 - 3752981 | 22330.9 |
| nipsnap family containing protein | RT97_17495 | Not Available | Positive | 3753104 - 3753409 | 11778.0 |
| had family hydrolase | RT97_17500 | Not Available | Negative | 3753539 - 3754270 | 26403.6 |
| ferrochelatase | RT97_17505 | Not Available | Positive | 3754286 - 3755305 | 37398.8 |
| hypothetical protein | RT97_17510 | Not Available | Negative | 3755341 - 3755847 | 18374.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
