Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase | RT97_01640 | Not Available | Positive | 358143 - 358670 | 19366.8 |
| damage-inducible protein cina | RT97_01645 | Not Available | Positive | 358664 - 359203 | 18509.0 |
| twin-arginine translocation pathway signal protein | RT97_01650 | Not Available | Negative | 359221 - 360414 | 43341.4 |
| ketosteroid isomerase | RT97_01655 | Not Available | Positive | 360611 - 361105 | 18247.6 |
| acetyltransferase | RT97_01660 | Not Available | Positive | 361102 - 361413 | 11482.7 |
| mfs transporter | RT97_01665 | Not Available | Negative | 361522 - 362742 | 42485.2 |
| zinc chelation protein secc | RT97_01670 | Not Available | Negative | 362874 - 363659 | 29613.3 |
| glutamate synthase | RT97_01675 | Not Available | Positive | 363716 - 365503 | 63596.4 |
| hypothetical protein | RT97_01680 | Not Available | Positive | 365568 - 366470 | 32613.2 |
| hypothetical protein | RT97_01695 | Not Available | Negative | 368801 - 369937 | 41477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
