Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gentisate 1,2-dioxygenase | RT97_17360 | Not Available | Negative | 3716209 - 3717306 | 40159.7 |
| lysr family transcriptional regulator | RT97_17365 | Not Available | Positive | 3717439 - 3718335 | 33097.0 |
| thioesterase | RT97_17370 | Not Available | Positive | 3718434 - 3718883 | 15955.3 |
| poly(hydroxyalkanoate) granule-associated protein | RT97_17375 | Not Available | Positive | 3718971 - 3719453 | 16836.0 |
| tetr family transcriptional regulator | RT97_17380 | Not Available | Positive | 3719579 - 3720277 | 26610.8 |
| hypothetical protein | RT97_17385 | Not Available | Positive | 3720386 - 3721129 | 26795.0 |
| dienelactone hydrolase | RT97_17390 | Not Available | Negative | 3721140 - 3722021 | 31843.9 |
| acyl-coa-binding protein | RT97_17395 | Not Available | Positive | 3722085 - 3722345 | 9430.03 |
| coa-transferase | RT97_17400 | Not Available | Negative | 3722436 - 3723692 | 43713.6 |
| arac family transcriptional regulator | RT97_17405 | Not Available | Positive | 3723995 - 3724885 | 33283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
