Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein this | RT97_17145 | Not Available | Negative | 3666673 - 3666876 | 7211.68 |
| glycine oxidase | RT97_17150 | Not Available | Negative | 3666873 - 3667973 | 39034.3 |
| phosphomethylpyrimidine kinase | RT97_17155 | Not Available | Positive | 3668114 - 3668980 | 29406.8 |
| allantoin permease | RT97_17160 | Not Available | Negative | 3668925 - 3670259 | 46525.4 |
| hypothetical protein | RT97_17165 | Not Available | Positive | 3670563 - 3670742 | 6238.52 |
| mannose-1-phosphate guanyltransferase | RT97_17170 | Not Available | Negative | 3670765 - 3672279 | 53745.1 |
| luxr family transcriptional regulator | RT97_17180 | Not Available | Negative | 3673093 - 3673914 | 30154.1 |
| glycosyl transferase | RT97_17190 | Not Available | Negative | 3675162 - 3676469 | 46965.9 |
| polysaccharide biosynthesis protein | RT97_17195 | Not Available | Negative | 3676480 - 3677736 | 44420.0 |
| hypothetical protein | RT97_17200 | Not Available | Negative | 3677733 - 3678689 | 34974.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
