Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | RT97_17075 | Not Available | Negative | 3655715 - 3656776 | 39746.5 |
| peptidoglycan-binding protein | RT97_17080 | Not Available | Negative | 3656857 - 3657747 | 29635.2 |
| hypothetical protein | RT97_17085 | Not Available | Positive | 3658062 - 3658280 | 7194.62 |
| elongation factor greab | RT97_17090 | Not Available | Negative | 3658309 - 3658710 | 14397.2 |
| polysaccharide deacetylase | RT97_17095 | Not Available | Negative | 3658968 - 3659255 | 10600.4 |
| hypothetical protein | RT97_17115 | Not Available | Negative | 3661204 - 3661458 | 8936.99 |
| Trna-asn | Not Available | Not Available | Positive | 3662583 - 3662658 | Not Available |
| tonb-dependent receptor | RT97_17130 | Not Available | Negative | 3662742 - 3664886 | 78831.5 |
| thiamine-phosphate diphosphorylase | RT97_17135 | Not Available | Negative | 3664895 - 3665830 | 32507.7 |
| thiazole synthase | RT97_17140 | Not Available | Negative | 3665836 - 3666648 | 28977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
