Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor faimly transcriptional regulator | RT97_16975 | Not Available | Negative | 3635909 - 3636901 | 36239.6 |
| aldehyde-activating protein | RT97_16980 | Not Available | Positive | 3636992 - 3637396 | 14699.5 |
| molybdenum abc transporter substrate-binding protein | RT97_16985 | Not Available | Negative | 3637387 - 3638055 | 22892.5 |
| hypothetical protein | RT97_16990 | Not Available | Negative | 3638091 - 3639086 | 34116.6 |
| protocatechuate 3,4-dioxygenase | RT97_16995 | Not Available | Negative | 3639083 - 3640393 | 48095.4 |
| hypothetical protein | RT97_17000 | Not Available | Negative | 3640405 - 3641103 | 24631.8 |
| 4-oxalomesaconate hydratase | RT97_17005 | Not Available | Negative | 3641107 - 3642135 | 38705.3 |
| lysr family transcriptional regulator | RT97_17010 | Not Available | Positive | 3642264 - 3643553 | 46010.8 |
| hypothetical protein | RT97_17015 | Not Available | Negative | 3643574 - 3644701 | 39807.1 |
| alpha/beta hydrolase | RT97_17020 | Not Available | Negative | 3644800 - 3645672 | 31746.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
