Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase | RT97_16925 | Not Available | Positive | 3625530 - 3627860 | 82132.5 |
| transcriptional regulator | RT97_16930 | Not Available | Positive | 3627900 - 3628811 | 33045.9 |
| lactoylglutathione lyase | RT97_16935 | Not Available | Positive | 3628790 - 3629158 | 12659.6 |
| polyketide cyclase | RT97_16940 | Not Available | Positive | 3629182 - 3629586 | 14585.4 |
| 4-hydroxybenzoate 3-monooxygenase | RT97_16945 | Not Available | Negative | 3629583 - 3630764 | 43523.7 |
| iclr family transcriptional regulator | RT97_16950 | Not Available | Positive | 3630897 - 3631667 | 28028.0 |
| regulator | RT97_16955 | Not Available | Positive | 3631806 - 3632465 | 24600.0 |
| histidine kinase | RT97_16960 | Not Available | Positive | 3632584 - 3633930 | 47830.0 |
| peptidase | RT97_16965 | Not Available | Positive | 3634101 - 3635576 | 50960.8 |
| hypothetical protein | RT97_16970 | Not Available | Positive | 3635623 - 3635934 | 10953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
