Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | RT97_01590 | Not Available | Negative | 348090 - 348566 | 17128.9 |
| hypothetical protein | RT97_01595 | Not Available | Positive | 348710 - 349735 | 36718.6 |
| abc transporter substrate-binding protein | RT97_01600 | Not Available | Positive | 349832 - 350809 | 34496.9 |
| twin-arginine translocation pathway signal protein | RT97_01605 | Not Available | Positive | 350826 - 352154 | 49266.4 |
| hypothetical protein | RT97_01610 | Not Available | Negative | 352188 - 353708 | 55831.4 |
| c4-dicarboxylate abc transporter | RT97_01615 | Not Available | Positive | 354001 - 354999 | 34880.8 |
| hypothetical protein | RT97_01620 | Not Available | Negative | 355220 - 355504 | 10107.0 |
| padr family transcriptional regulator | RT97_01625 | Not Available | Positive | 356166 - 356786 | 22145.3 |
| fad-binding protein | RT97_01630 | Not Available | Positive | 356802 - 357044 | 9049.78 |
| mfs transporter | RT97_01635 | Not Available | Negative | 357045 - 357962 | 31534.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
