Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | RT97_16770 | Not Available | Negative | 3593438 - 3593887 | 16436.0 |
| hypothetical protein | RT97_16775 | Not Available | Positive | 3593961 - 3594953 | 34609.9 |
| amidohydrolase | RT97_16780 | Not Available | Positive | 3594971 - 3595942 | 36944.1 |
| salicylate hydroxylase | RT97_16785 | Not Available | Positive | 3595944 - 3597155 | 44095.6 |
| doxx | RT97_16795 | Not Available | Positive | 3598576 - 3598950 | 13023.3 |
| maleylacetate reductase | RT97_16800 | Not Available | Positive | 3599048 - 3600109 | 36972.6 |
| helicase snf2 | RT97_16805 | Not Available | Negative | 3600184 - 3600567 | 12502.5 |
| guanylate cyclase | RT97_16810 | Not Available | Negative | 3600682 - 3602310 | 59170.0 |
| cyclic nucleotide-binding protein | RT97_16815 | Not Available | Positive | 3602415 - 3603137 | 26105.4 |
| gntr family transcriptional regulator | RT97_16820 | Not Available | Negative | 3603147 - 3603617 | 16023.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
