Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_16665 | Not Available | Positive | 3570800 - 3572035 | 42088.7 |
| hypothetical protein | RT97_16670 | Not Available | Positive | 3572121 - 3574874 | 100348.0 |
| hypothetical protein | RT97_16680 | Not Available | Positive | 3575257 - 3575889 | 22371.4 |
| ribosomal rna large subunit methyltransferase n | RT97_16685 | Not Available | Positive | 3575970 - 3577028 | 37989.1 |
| hypothetical protein | RT97_16690 | Not Available | Negative | 3577006 - 3577431 | 15153.1 |
| dna polymerase ii | RT97_16695 | Not Available | Negative | 3577626 - 3580016 | 89890.0 |
| glyoxalase | RT97_16700 | Not Available | Negative | 3580089 - 3580460 | 12864.4 |
| hypothetical protein | RT97_16705 | Not Available | Positive | 3580712 - 3581137 | 14610.9 |
| sam-dependent methyltransferase | RT97_16710 | Not Available | Positive | 3581239 - 3581967 | 26523.8 |
| hypothetical protein | RT97_16715 | Not Available | Negative | 3582008 - 3582277 | 9634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
