Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl aminopeptidase | RT97_16615 | Not Available | Positive | 3560345 - 3561277 | 33238.6 |
| hyalin | RT97_16620 | Not Available | Negative | 3561258 - 3562685 | 50065.0 |
| l-dehydroascorbate transporter large permease subunit | RT97_16625 | Not Available | Negative | 3562687 - 3563967 | 44663.2 |
| c4-dicarboxylate abc transporter permease | RT97_16630 | Not Available | Negative | 3563964 - 3564539 | 20658.8 |
| 3-dehydroquinate dehydratase | RT97_16635 | Not Available | Negative | 3564536 - 3564991 | 16181.7 |
| transporter | RT97_16640 | Not Available | Positive | 3565077 - 3567137 | 67182.5 |
| hypothetical protein | RT97_16645 | Not Available | Negative | 3567168 - 3569009 | 65432.3 |
| luxr family transcriptional regulator | RT97_16650 | Not Available | Negative | 3569006 - 3569614 | 21537.2 |
| hypothetical protein | RT97_16655 | Not Available | Negative | 3569718 - 3570134 | 13986.5 |
| hypothetical protein | RT97_16660 | Not Available | Positive | 3570133 - 3570903 | 28462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
