Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | RT97_01540 | Not Available | Positive | 339952 - 340419 | 17319.7 |
| glyoxalase | RT97_01545 | Not Available | Positive | 340430 - 340840 | 14926.0 |
| daunorubicin resistance protein drrc | RT97_01550 | Not Available | Positive | 340901 - 343309 | 85298.6 |
| arac family transcriptional regulator | RT97_01555 | Not Available | Negative | 343325 - 344203 | 31412.2 |
| carboxymuconolactone decarboxylase | RT97_01560 | Not Available | Positive | 344300 - 344845 | 18496.2 |
| alkyl hydroperoxide reductase | RT97_01565 | Not Available | Positive | 344910 - 345497 | 20804.9 |
| molybdenum cofactor sulfurase | RT97_01570 | Not Available | Positive | 345494 - 346201 | 25862.7 |
| hypothetical protein | RT97_01575 | Not Available | Negative | 346253 - 346921 | 24784.3 |
| hypothetical protein | RT97_01580 | Not Available | Positive | 347071 - 347325 | 9309.86 |
| dna polymerase | RT97_01585 | Not Available | Negative | 347356 - 347967 | 22460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
