Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination regulator | RT97_16300 | Not Available | Positive | 3492275 - 3493552 | 47153.4 |
| nitrate transporter | RT97_16305 | Not Available | Positive | 3493892 - 3495136 | 45689.1 |
| nitrate abc transporter permease | RT97_16310 | Not Available | Positive | 3495150 - 3496088 | 34091.3 |
| nitrate abc transporter atp-binding protein | RT97_16315 | Not Available | Positive | 3496144 - 3496953 | 29318.7 |
| antitermination regulator | RT97_16320 | Not Available | Negative | 3497096 - 3498376 | 45768.4 |
| mfs transporter | RT97_16325 | Not Available | Positive | 3498646 - 3499899 | 43872.7 |
| serine/threonine protein phosphatase | RT97_16330 | Not Available | Negative | 3500001 - 3501707 | 61287.1 |
| nitrite reductase | RT97_16335 | Not Available | Positive | 3501784 - 3504240 | 89902.2 |
| nitrite reductase | RT97_16340 | Not Available | Positive | 3504254 - 3504649 | 13932.7 |
| nitrate reductase | RT97_16345 | Not Available | Positive | 3504725 - 3507529 | 100440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
