Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone oxidoreductase subunit h | RT97_16200 | Not Available | Negative | 3472852 - 3473928 | 39800.1 |
| nadh dehydrogenase | RT97_16205 | Not Available | Negative | 3473925 - 3476096 | 76806.9 |
| nadh dehydrogenase | RT97_16210 | Not Available | Negative | 3476117 - 3477457 | 48462.0 |
| nadh dehydrogenase | RT97_16215 | Not Available | Negative | 3477457 - 3477951 | 18001.8 |
| nadh dehydrogenase | RT97_16220 | Not Available | Negative | 3478007 - 3479260 | 47574.6 |
| nadh dehydrogenase | RT97_16225 | Not Available | Negative | 3479262 - 3479873 | 23066.4 |
| nadh dehydrogenase | RT97_16230 | Not Available | Negative | 3479887 - 3480366 | 17582.5 |
| nadh:ubiquinone oxidoreductase subunit a | RT97_16235 | Not Available | Negative | 3480379 - 3480738 | 13457.8 |
| Trna-leu | Not Available | Not Available | Positive | 3480806 - 3480890 | Not Available |
| preprotein translocase subunit secg | RT97_16245 | Not Available | Negative | 3481010 - 3481420 | 12869.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
