Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | RT97_16150 | Not Available | Positive | 3462909 - 3464693 | 62867.3 |
| hypothetical protein | RT97_16155 | Not Available | Negative | 3464704 - 3465156 | 16181.4 |
| adp-ribose pyrophosphatase | RT97_16160 | Not Available | Negative | 3465164 - 3465769 | 22004.1 |
| membrane protein | RT97_16165 | Not Available | Negative | 3465775 - 3466080 | 11421.3 |
| nadh:ubiquinone oxidoreductase subunit n | RT97_16170 | Not Available | Negative | 3466097 - 3467584 | 52761.1 |
| nadh:ubiquinone oxidoreductase subunit m | RT97_16175 | Not Available | Negative | 3467611 - 3469089 | 53825.3 |
| nadh:ubiquinone oxidoreductase subunit l | RT97_16180 | Not Available | Negative | 3469115 - 3471160 | 75123.8 |
| nadh-quinone oxidoreductase subunit k | RT97_16185 | Not Available | Negative | 3471305 - 3471613 | 11184.3 |
| nadh:ubiquinone oxidoreductase subunit j | RT97_16190 | Not Available | Negative | 3471610 - 3472275 | 24056.1 |
| nadh dehydrogenase | RT97_16195 | Not Available | Negative | 3472313 - 3472834 | 19558.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
