Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chey | RT97_16100 | Not Available | Negative | 3453073 - 3453462 | 14018.7 |
| hypothetical protein | RT97_16105 | Not Available | Negative | 3453563 - 3453919 | 12852.0 |
| Trna-ser | Not Available | Not Available | Positive | 3454131 - 3454221 | Not Available |
| stomatin 2 | RT97_16115 | Not Available | Negative | 3454246 - 3455175 | 33574.5 |
| membrane protein implicated in regulation of membrane protease activity | RT97_16120 | Not Available | Negative | 3455210 - 3455635 | 14883.0 |
| lysine decarboxylase | RT97_16125 | Not Available | Positive | 3455833 - 3457815 | 74616.0 |
| multidrug resistance protein b | RT97_16130 | Not Available | Negative | 3457816 - 3459371 | 55733.9 |
| hemolysin d | RT97_16135 | Not Available | Negative | 3459410 - 3460756 | 46420.1 |
| rnd transporter | RT97_16140 | Not Available | Negative | 3460819 - 3462300 | 51809.4 |
| marr family transcriptional regulator | RT97_16145 | Not Available | Negative | 3462293 - 3462829 | 19998.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
