Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter substrate-binding protein | RT97_15940 | Not Available | Positive | 3419508 - 3420311 | 29055.9 |
| hypothetical protein | RT97_15945 | Not Available | Positive | 3420428 - 3420748 | 11072.3 |
| fasciclin | RT97_15950 | Not Available | Positive | 3420881 - 3421441 | 18866.1 |
| xre family transcriptional regulator | RT97_15960 | Not Available | Negative | 3422371 - 3423033 | 24271.7 |
| transcriptional regulator | RT97_15965 | Not Available | Positive | 3423147 - 3423383 | 8677.65 |
| hypothetical protein | RT97_15970 | Not Available | Positive | 3423391 - 3423624 | 8532.57 |
| hypothetical protein | RT97_15975 | Not Available | Negative | 3423569 - 3424078 | 17772.0 |
| abc transporter | RT97_15980 | Not Available | Negative | 3424102 - 3426081 | 72195.3 |
| protein-(glutamine-n5) methyltransferase | RT97_15985 | Not Available | Negative | 3426222 - 3427103 | 31302.2 |
| succinyl-diaminopimelate desuccinylase | RT97_15990 | Not Available | Negative | 3427100 - 3428275 | 41756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
