Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyvinylalcohol dehydrogenase | RT97_15890 | Not Available | Negative | 3409792 - 3410637 | 30379.8 |
| hypothetical protein | RT97_15895 | Not Available | Negative | 3410904 - 3411176 | 10079.0 |
| luciferase | RT97_15900 | Not Available | Positive | 3411552 - 3412619 | 37485.5 |
| avi_7170 family cmd domain-containing protein | RT97_15905 | Not Available | Positive | 3412665 - 3413276 | 21311.4 |
| alkylhydroperoxidase | RT97_15910 | Not Available | Positive | 3413312 - 3413905 | 21561.3 |
| sulfonate abc transporter atp-binding protein | RT97_15915 | Not Available | Negative | 3413922 - 3414782 | 31430.9 |
| taurine abc transporter permease | RT97_15920 | Not Available | Negative | 3414933 - 3415706 | 27892.4 |
| sulfonate abc transporter | RT97_15925 | Not Available | Negative | 3415751 - 3416611 | 30841.0 |
| nitrate abc transporter substrate-binding protein | RT97_15930 | Not Available | Negative | 3416608 - 3417717 | 40002.5 |
| amidohydrolase | RT97_15935 | Not Available | Negative | 3417714 - 3419231 | 56820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
