Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | RT97_00095 | Not Available | Negative | 15867 - 16805 | 36279.2 |
| desaturase | RT97_00100 | Not Available | Negative | 16789 - 17571 | 29717.1 |
| phospholipase | RT97_00105 | Not Available | Negative | 17581 - 19155 | 57747.8 |
| peroxiredoxin | RT97_00110 | Not Available | Positive | 19285 - 19857 | 20197.1 |
| hypothetical protein | RT97_00115 | Not Available | Negative | 19882 - 21219 | 48050.5 |
| hypothetical protein | RT97_00125 | Not Available | Negative | 23813 - 25291 | 50629.7 |
| aldehyde dehydrogenase | RT97_00130 | Not Available | Positive | 25637 - 27070 | 51228.0 |
| divalent cation transporter | RT97_00135 | Not Available | Negative | 27188 - 28093 | 31033.6 |
| superoxide dismutase | RT97_00140 | Not Available | Negative | 28129 - 28767 | 22943.0 |
| hypothetical protein | RT97_00145 | Not Available | Positive | 28961 - 29662 | 24622.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
