Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | RT97_15840 | Not Available | Negative | 3400770 - 3401552 | 26543.9 |
| polyketide cyclase | RT97_15845 | Not Available | Negative | 3401549 - 3401878 | 12006.3 |
| lysr family transcriptional regulator | RT97_15850 | Not Available | Positive | 3401978 - 3402880 | 32968.7 |
| cysteine desulfhydrase | RT97_15855 | Not Available | Negative | 3403026 - 3404426 | 51680.9 |
| asnc family transcriptional regulator | RT97_15860 | Not Available | Positive | 3404621 - 3405091 | 17394.4 |
| histidine kinase | RT97_15865 | Not Available | Negative | 3405127 - 3407118 | 72494.8 |
| histidine kinase | RT97_15870 | Not Available | Negative | 3407121 - 3407975 | 31183.2 |
| histidine kinase | RT97_15875 | Not Available | Negative | 3407994 - 3409022 | 35911.5 |
| anti-sigma regulatory factor | RT97_15880 | Not Available | Negative | 3409013 - 3409417 | 14528.6 |
| anti-sigma factor antagonist | RT97_15885 | Not Available | Negative | 3409407 - 3409781 | 13388.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
