Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid transporter atp-binding/permease | RT97_15785 | Not Available | Negative | 3388723 - 3390507 | 65103.8 |
| translocation protein tolb | RT97_15790 | Not Available | Positive | 3390762 - 3391988 | 43768.4 |
| peptidoglycan-binding protein | RT97_15800 | Not Available | Positive | 3393373 - 3393894 | 18513.7 |
| tol-pal system protein | RT97_15805 | Not Available | Positive | 3393894 - 3394643 | 27918.0 |
| heme biosynthesis protein hemy | RT97_15810 | Not Available | Positive | 3394663 - 3395505 | 29154.7 |
| Trna-lys | Not Available | Not Available | Positive | 3395555 - 3395630 | Not Available |
| hypothetical protein | RT97_15820 | Not Available | Negative | 3396171 - 3396557 | 13279.4 |
| oxidoreductase | RT97_15825 | Not Available | Negative | 3396702 - 3398291 | 56738.3 |
| hypothetical protein | RT97_15830 | Not Available | Positive | 3398504 - 3399559 | 38048.7 |
| hydrolase | RT97_15835 | Not Available | Negative | 3399716 - 3400483 | 27018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
